Search results for "WEB SERVER"

showing 10 items of 45 documents

KnotGenome: a server to analyze entanglements of chromosomes.

2018

Abstract The KnotGenome server enables the topological analysis of chromosome model data using three-dimensional coordinate files of chromosomes as input. In particular, it detects prime and composite knots in single chromosomes, and links between chromosomes. The knotting complexity of the chromosome is presented in the form of a matrix diagram that reveals the knot type of the entire polynucleotide chain and of each of its subchains. Links are determined by means of the Gaussian linking integral and the HOMFLY-PT polynomial. Entangled chromosomes are presented graphically in an intuitive way. It is also possible to relax structure with short molecular dynamics runs before the analysis. Kn…

0301 basic medicinePolynomialProtein ConformationGaussianPolynucleotidesBiologyType (model theory)Molecular Dynamics SimulationPrime (order theory)ChromosomesQuantitative Biology::Subcellular Processes03 medical and health sciencessymbols.namesakeMatrix (mathematics)Knot (unit)Chain (algebraic topology)GeneticsDiscrete mathematicsInternetDiagramComputational BiologyMathematics::Geometric TopologyQuantitative Biology::Genomics030104 developmental biologyWeb Server IssuesymbolsAlgorithmsSoftwareNucleic acids research
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Growing Hierarchical Self-organizing Maps and Statistical Distribution Models for Online Detection of Web Attacks

2013

In modern networks, HTTP clients communicate with web servers using request messages. By manipulating these messages attackers can collect confidential information from servers or even corrupt them. In this study, the approach based on anomaly detection is considered to find such attacks. For HTTP queries, feature matrices are obtained by applying an n-gram model, and, by learning on the basis of these matrices, growing hierarchical self-organizing maps are constructed. For HTTP headers, we employ statistical distribution models based on the lengths of header values and relative frequency of symbols. New requests received by the web-server are classified by using the maps and models obtaine…

Self-organizing mapWeb serverComputer scienceServerHeaderSingle-linkage clusteringAnomaly detectionIntrusion detection systemData miningWeb servicecomputer.software_genrecomputer
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Investigating Long-Range Dependence in E-Commerce Web Traffic

2016

This paper addresses the problem of investigating long-range dependence (LRD) and self-similarity in Web traffic. Popular techniques for estimating the intensity of LRD via the Hurst parameter are presented. Using a set of traces of a popular e-commerce site, the presence and the nature of LRD in Web traffic is examined. Our results confirm the self-similar nature of traffic at a Web server input, however the resulting estimates of the Hurst parameter vary depending on the trace and the technique used.

h indexWeb serverweb serverSelf-similarityComputer science02 engineering and technologyE-commercecomputer.software_genre01 natural sciencesSet (abstract data type)010104 statistics & probabilityWeb traffichurst indexlong-range dependence0202 electrical engineering electronic engineering information engineeringRange (statistics)0101 mathematicsTRACE (psycholinguistics)Hurst exponenthurst parameterself-similaritybusiness.industryweb trafficHTTP traffic020201 artificial intelligence & image processingData miningbusinesscomputer
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Feature selection: A multi-objective stochastic optimization approach

2020

The feature subset task can be cast as a multiobjective discrete optimization problem. In this work, we study the search algorithm component of a feature subset selection method. We propose an algorithm based on the threshold accepting method, extended to the multi-objective framework by an appropriate definition of the acceptance rule. The method is used in the task of identifying relevant subsets of features in a Web bot recognition problem, where automated software agents on the Web are identified by analyzing the stream of HTTP requests to a Web server.

Web serverLinear programmingthreshold acceptingComputer scienceFeature extractionFeature selectionstochastic optimizationcomputer.software_genreMulti-objective optimizationfeature selection; multiobjective optimization; stochastic optimization; subset selection; threshold acceptingfeature selectionsubset selectionFeature (computer vision)Search algorithmStochastic optimizationmultiobjective optimizationData miningcomputer
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Simulation-Based Performance Study of e-Commerce Web Server System – Results for FIFO Scheduling

2013

The chapter concerns the issue of overloaded Web server performance evaluation using a simulation-based approach. We focus on a Business-to-Consumer (B2C) environment and consider server performance both from the perspective of computer system efficiency and e-business profitability. Results of simulation experiments for the Web server system under First-In-First-Out (FIFO) scheduling are discussed. Much attention has been paid to the analysis of the impact of a limited server system capacity on business-related performance metrics.

Web serverComputer sciencebusiness.industryE-commercecomputer.software_genreFair-share schedulingScheduling (computing)Operating systemProfitability indexbusinessServer systemWeb server performancecomputerSimulation based
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Web Monitoring System and Gateway for Serial Communication PLC

2012

Abstract An industrial process requires interacting with the rest of the plant, being able to exchange data with other devices and monitoring systems in order to optimize production, reporting information and providing control capabilities to distant users. Internet, and, especially web browsers are an excellent tool to provide information for remote users, allowing not only monitoring but also controlling the industrial process as an SCADA software or HMI system. The proposed system does not need specific proprietary software and its associated license costs. In this work, a webserver system is implemented under a Freescale microcontroller, acting as a gateway for a simple PLC with single …

Web serverEngineeringbusiness.industrySerial communicationComputerApplications_COMPUTERSINOTHERSYSTEMSGeneral MedicineGateway (computer program)Modular designcomputer.software_genreSoftwareSCADAEmbedded systemWeb pageOperating systemThe InternetbusinesscomputerIFAC Proceedings Volumes
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VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy

2017

The possibility of integrating viral vectors to become a persistent part of the host genome makes them a crucial element of clinical gene therapy. However, viral integration has associated risks, such as the unintentional activation of oncogenes that can result in cancer. Therefore, the analysis of integration sites of retroviral vectors is a crucial step in developing safer vectors for therapeutic use. Here we present VISMapper, a vector integration site analysis web server, to analyze next-generation sequencing data for retroviral vector integration sites. VISMapper can be found at: http://vismapper.babelomics.org . Because it uses novel mapping algorithms VISMapper is remarkably faster t…

0301 basic medicineWeb serverVirus IntegrationGenetic enhancementGenetic VectorsContext (language use)Computational biologyBiologyGenoma humàlcsh:Computer applications to medicine. Medical informaticscomputer.software_genreBiochemistryGenome viewerViral vectorViral integrationUser-Computer Interface03 medical and health sciencesGene therapyStructural BiologySAFERViral insertionSequence mappingHumansUltra fastGens Mapatgelcsh:QH301-705.5Molecular BiologyGeneticsInternetBase SequenceApplied MathematicsHigh-Throughput Nucleotide SequencingGenetic Therapy3. Good healthComputer Science Applications030104 developmental biologylcsh:Biology (General)lcsh:R858-859.7Viral integrationDNA microarraycomputerSoftware
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Protein knot server: detection of knots in protein structures

2007

KNOTS (http://knots.mit.edu) is a web server that detects knots in protein structures. Several protein structures have been reported to contain intricate knots. The physiological role of knots and their effect on folding and evolution is an area of active research. The user submits a PDB id or uploads a 3D protein structure in PDB or mmCIF format. The current implementation of the server uses the Alexander polynomial to detect knots. The results of the analysis that are presented to the user are the location of the knot in the structure, the type of the knot and an interactive visualization of the knot. The results can also be downloaded and viewed offline. The server also maintains a regul…

Models MolecularWeb serverProtein FoldingTheoretical computer scienceProtein ConformationProtein Data Bank (RCSB PDB)MathematicsofComputing_NUMERICALANALYSISAlexander polynomialBiologyBioinformaticscomputer.software_genreUploadUser-Computer InterfaceKnot (unit)Protein structureTheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITYComputingMethodologies_SYMBOLICANDALGEBRAICMANIPULATIONGeneticsComputer SimulationSurgical knotsDatabases ProteinInteractive visualizationComputingMethodologies_COMPUTERGRAPHICSInternetQuantitative Biology::BiomoleculesModels StatisticalComputational BiologyProteinsArticlesHaemophilus influenzaeMathematics::Geometric TopologycomputerAlgorithmsSoftwareMathematicsofComputing_DISCRETEMATHEMATICS
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Delfos: the Oracle to Predict NextWeb User's Accesses

2007

Despite the wide and intensive research efforts focused on Web prediction and prefetching techniques aimed to reduce user's perceived latency, few attempts to implement and use them in real environments have been done, mainly due to their complexity and supposed limitations that low user available bandwidths imposed few years ago. Nevertheless, current user bandwidths open a new scenario for prefetching that becomes again an interesting option to improve web performance. This paper presents Delfos, a framework to perform web predictions and prefetching on a real environment that tries to cover the existing gap between research and praxis. Delfos is integrated in the web architecture without…

Web serverWebsite architectureDatabaseComputer sciencecomputer.internet_protocolWeb performanceService-oriented architectureWeb servicecomputer.software_genreSoftware architecturecomputerServer-sideOracle21st International Conference on Advanced Networking and Applications (AINA '07)
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Web Server Support for e-Customer Loyalty through QoS Differentiation

2013

The paper deals with the problem of offering predictive service in e-commerce Web server systems under overload. Due to unpredictability of Web accesses, such systems often fail to effectively handle peak traffic, which results in long delays and incomplete transactions. As a consequence, online retailers miss an opportunity to attract new customers, retain the loyalty of regular customers, and increase profits. We propose a method for priority-based admission control and scheduling of requests at the Web server system in order to differentiate Quality of Service (QoS) with regard to user-perceived delays, i.e., Web page response times provided by the system (as opposed to HTTP request resp…

Web serverbusiness.industryComputer scienceQuality of serviceRequest–responseE-commerceAdmission controlcomputer.software_genreLoyalty business modelScheduling (computing)Web pagebusinesscomputerComputer network
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